Best TWAS P=2.93e-09 · Best GWAS P=2.27e-09 conditioned to 0.00229
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Skin Sun Exposed Lower leg | IPPK | 0.17 | 0.07 | enet | 8 | 0.07 | 2.7e-06 | -5.8 | 5.1 | 2.7e-07 | 0.04 | 0.01 | 0.99 | FALSE |
| 2 | GTEx | Testis | NFIL3 | 0.47 | 0.33 | enet | 8 | 0.29 | 3.8e-13 | -5.9 | 5.9 | 2.9e-09 | -0.67 | 0.00 | 1.00 | TRUE |
| 3 | The Cancer Genome Atlas | Thyroid Carcinoma | IPPK | 0.03 | 0.04 | blup | 50 | 0.04 | 6.7e-05 | -5.3 | 5.4 | 8.5e-08 | 0.05 | 0.01 | 0.98 | TRUE |