Best TWAS P=1.67e-07 · Best GWAS P=2.51e-07 conditioned to 0.00827
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Breast Mammary Tissue | ANAPC4 | 0.49 | 0.42 | lasso | 8 | 0.42 | 1.5e-23 | 4.9 | 5.2 | 1.7e-07 | 0.57 | 0.02 | 0.97 | TRUE |
| 2 | GTEx | Testis | ZCCHC4 | 0.14 | 0.11 | lasso | 4 | 0.05 | 1.9e-03 | 5.2 | 5.2 | 2.6e-07 | 0.99 | 0.01 | 0.97 | FALSE |