[Hub]/) : Traits : Arm predicted mass (left) :

chr3:55,894,951-57,412,804

Best TWAS P=1.15e-12 · Best GWAS P=3.9e-10 conditioned to 0.117

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous FAM208A 0.12 0.09 enet 11 0.12 1.1e-09 -3.3 5.3 1.2e-07 -0.82 0.03 0.97 FALSE
2 GTEx Cells Transformed fibroblasts FAM208A 0.10 0.00 lasso 4 0.00 1.3e-01 -6.2 5.9 4.0e-09 -0.82 0.01 0.97 FALSE
3 YFS Blood CCDC66 0.11 0.09 lasso 8 0.11 6.0e-34 -5.2 -5.2 1.6e-07 0.53 0.79 0.21 FALSE
4 The Cancer Genome Atlas Breast Invasive Carcinoma CCDC66 0.09 0.03 lasso 8 0.05 4.2e-11 -4.6 -6.5 1.1e-10 0.54 0.20 0.79 FALSE
5 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma CCDC66 0.05 0.05 blup 56 0.06 1.0e-07 -6.2 -7.0 2.8e-12 0.79 0.00 1.00 FALSE
6 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma C3orf63 0.03 0.01 enet 4 0.01 1.3e-02 -6.2 5.7 1.3e-08 -0.89 0.01 0.89 FALSE
7 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma CCDC66 0.09 0.05 blup 56 0.06 5.3e-07 -5.2 -5.2 2.4e-07 0.69 0.53 0.47 FALSE
8 The Cancer Genome Atlas Brain Lower Grade Glioma CCDC66 0.16 0.13 enet 12 0.16 3.1e-17 -5.2 -5.2 1.7e-07 0.34 0.58 0.41 FALSE
9 The Cancer Genome Atlas Lung Adenocarcinoma CCDC66 0.05 0.06 blup 56 0.05 9.7e-07 -6.2 -7.1 1.1e-12 0.73 0.00 1.00 TRUE
10 The Cancer Genome Atlas Lung Squamous Cell Carcinoma CCDC66 0.03 0.03 blup 56 0.03 9.6e-05 -4.5 -5.8 7.5e-09 0.51 0.29 0.36 FALSE
11 The Cancer Genome Atlas Pheochromocytoma and Paraganglioma CCDC66 0.08 0.01 blup 56 0.07 7.2e-04 -5.2 -5.2 1.5e-07 0.32 0.11 0.12 FALSE
12 The Cancer Genome Atlas Prostate Adenocarcinoma CCDC66 0.15 0.10 enet 11 0.13 7.3e-14 -4.5 -5.4 7.1e-08 0.48 0.72 0.28 FALSE
13 The Cancer Genome Atlas Stomach Adenocarcinoma CCDC66 0.05 0.01 blup 57 0.02 8.4e-03 -4.6 -5.9 4.2e-09 0.55 0.07 0.56 FALSE