[Hub]/) : Traits : Trunk fat mass : ← →

chr11:26,818,083-29,054,545

Best TWAS P=2.44e-23 · Best GWAS P=2.61e-30 conditioned to 7.1e-07

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous LIN7C 0.08 0.06 lasso 1 0.04 4.1e-04 9.8 9.8 9.6e-23 0.63 0.74 0.14 FALSE
2 GTEx Brain Putamen basal ganglia BDNF-AS 0.22 0.17 lasso 4 0.13 5.5e-04 -6.4 7.7 1.0e-14 0.33 0.23 0.05 FALSE
3 GTEx Cells Transformed fibroblasts LIN7C 0.26 0.22 lasso 6 0.25 1.4e-18 9.8 8.2 2.3e-16 0.62 1.00 0.00 FALSE
4 GTEx Esophagus Muscularis LIN7C 0.14 0.08 enet 11 0.07 5.4e-05 3.3 7.1 9.5e-13 0.60 0.69 0.16 FALSE
5 GTEx Liver METTL15 0.18 0.05 lasso 3 0.09 1.9e-03 1.1 -8.2 1.7e-16 -0.68 0.02 0.83 FALSE
6 GTEx Nerve Tibial LIN7C 0.18 0.08 enet 27 0.12 4.2e-09 9.8 6.1 9.8e-10 0.56 0.62 0.35 FALSE
7 GTEx Thyroid LIN7C 0.08 0.04 lasso 4 0.04 6.0e-04 9.8 9.4 3.3e-21 0.69 0.53 0.35 FALSE
8 NTR Blood LIN7C 0.01 0.00 lasso 3 0.01 2.2e-03 10.2 -9.9 2.4e-23 -0.72 0.10 0.80 TRUE
9 The Cancer Genome Atlas Bladder Urothelial Carcinoma LIN7C 0.04 0.01 lasso 3 0.02 1.0e-02 -1.9 6.0 2.5e-09 0.46 0.02 0.83 FALSE
10 The Cancer Genome Atlas Colon Adenocarcinoma LIN7C 0.10 0.03 blup 32 0.08 2.8e-05 10.2 8.1 4.0e-16 0.57 0.01 0.96 FALSE
11 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma LIN7C 0.05 0.02 lasso 3 0.03 2.9e-04 10.2 9.2 5.5e-20 0.63 0.00 0.99 FALSE
12 The Cancer Genome Atlas Brain Lower Grade Glioma LIN7C 0.09 0.12 lasso 2 0.12 2.6e-13 3.5 5.7 1.5e-08 0.52 0.92 0.08 FALSE
13 The Cancer Genome Atlas Lung Adenocarcinoma LIN7C 0.02 0.02 enet 3 0.02 5.6e-03 2.4 5.3 1.1e-07 0.52 0.01 0.71 TRUE
14 The Cancer Genome Atlas Thyroid Carcinoma LIN7C 0.09 0.10 enet 7 0.09 8.1e-09 3.5 5.2 2.1e-07 0.48 0.91 0.09 FALSE