Best TWAS P=4.52e-10 · Best GWAS P=3.7e-10 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Skin Not Sun Exposed Suprapubic | TEX10 | 0.10 | 0.09 | lasso | 4 | 0.10 | 3.1e-06 | 4.0 | 5.2 | 2.1e-07 | 0.91 | 0.02 | 0.98 | FALSE |
| 2 | GTEx | Skin Sun Exposed Lower leg | TEX10 | 0.27 | 0.27 | lasso | 8 | 0.28 | 7.0e-23 | 6.2 | 6.2 | 4.5e-10 | 0.99 | 0.01 | 0.99 | TRUE |
| 3 | The Cancer Genome Atlas | Cervical Squamous Cell Carcinoma | INVS | 0.10 | 0.03 | blup | 107 | 0.07 | 4.0e-04 | 6.1 | 5.3 | 1.2e-07 | 0.88 | 0.01 | 0.96 | FALSE |