Best TWAS P=4.2e-17 · Best GWAS P=1.05e-15 conditioned to 0.537
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Visceral Omentum | NLRX1 | 0.14 | 0.03 | lasso | 5 | 0.03 | 9.6e-03 | 7.9 | -8.4 | 4.2e-17 | -0.93 | 0.01 | 0.96 | TRUE |
| 2 | The Cancer Genome Atlas | Prostate Adenocarcinoma | TREH | 0.05 | 0.05 | lasso | 2 | 0.04 | 2.7e-05 | 5.7 | 5.7 | 1.1e-08 | 0.71 | 0.00 | 0.99 | FALSE |
| 3 | The Cancer Genome Atlas | Thyroid Carcinoma | TREH | 0.27 | 0.18 | lasso | 3 | 0.21 | 8.6e-20 | 5.7 | 5.7 | 1.2e-08 | 0.68 | 0.00 | 1.00 | FALSE |