TWAS
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Traits
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Traits
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Trunk fat-free mass
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chr17:40,009,690-41,393,295
Best TWAS P=7.19e-08 · Best GWAS P=5.28e-07 conditioned to 0.767
40M
40.2M
40.4M
40.6M
40.8M
41M
41.2M
41.4M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Adipose Subcutaneous
HSD17B1P1
0.06
0.09
enet
6
0.09
4.0e-08
-4.8
-5.4
7.2e-08
0.91
0.02
0.97
TRUE
2
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
NAGLU
0.13
0.02
enet
8
0.04
1.6e-05
3.4
-5.4
7.9e-08
0.78
0.01
0.82
FALSE