TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Trunk predicted mass
:
←
→
chr7:55,334,240-56,878,413
Best TWAS P=2.1e-08 · Best GWAS P=3.66e-10 conditioned to 0.000207
55.4M
55.6M
55.8M
56M
56.2M
56.4M
56.6M
56.8M
0
2
4
6
8
10
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
GTEx
Prostate
GBAS
0.33
0.08
lasso
8
0.13
3.4e-04
-2.6
-5.6
2.1e-08
0.58
0.10
0.51
TRUE
1
CommonMind
Brain Pre-frontal Cortex
PSPH
0.19
0.09
lasso
8
0.12
2.5e-14
-5.8
-5.4
6.4e-08
0.79
0.02
0.98
FALSE
3
METSIM
Adipose
PSPH
0.16
0.13
lasso
15
0.17
2.9e-25
-5.8
-5.3
9.4e-08
0.77
0.02
0.98
FALSE