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Trunk predicted mass
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chr12:45,890,331-47,465,082
Best TWAS P=4.61e-21 · Best GWAS P=4.94e-24 conditioned to 0.00605
45.8M
46M
46.2M
46.4M
46.6M
46.8M
47M
47.2M
47.4M
0
5
10
15
20
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Kidney Renal Papillary Cell Carcinoma
SLC38A2
0.10
0.06
blup
30
0.05
8.3e-04
-10.1
9.4
4.6e-21
-0.91
0.01
0.92
TRUE
2
NTR
Blood
SLC38A1
0.12
0.07
lasso
6
0.08
8.4e-24
5.6
-5.7
1.4e-08
0.07
1.00
0.00
TRUE
4
The Cancer Genome Atlas
Soft Tissue Sarcoma
SLC38A2
0.06
0.01
blup
30
0.03
5.1e-03
-10.0
8.8
1.6e-18
-0.92
0.02
0.76
FALSE
1
METSIM
Adipose
SLC38A2
0.02
0.02
blup
341
0.01
5.8e-03
-9.2
8.6
8.2e-18
-0.87
0.07
0.88
FALSE