[Hub]/) : Traits : Trunk predicted mass :

chr1:7,314,655-8,878,885

Best TWAS P=6.74e-10 · Best GWAS P=3.93e-09 conditioned to 0.000372

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 NTR Blood PARK7 0.02 0.01 lasso 3 0.01 1.4e-05 5.4 5.5 3.1e-08 -0.39 0.02 0.98 FALSE
2 ROSMAP Brain Pre-frontal Cortex RP11-431K24.1 0.16 0.16 bslmm 384 0.17 3.1e-21 -5.6 -6.1 8.5e-10 0.92 0.07 0.93 FALSE
3 YFS Blood PARK7 0.08 0.11 lasso 6 0.11 4.4e-34 5.4 5.5 3.0e-08 -0.38 0.16 0.84 FALSE
4 The Cancer Genome Atlas Breast Invasive Carcinoma ERRFI1 0.01 0.01 blup 27 0.00 4.3e-02 5.4 -5.7 1.1e-08 0.39 0.01 0.78 FALSE
5 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma PARK7 0.03 0.03 enet 3 0.02 1.3e-03 5.9 6.2 6.7e-10 -0.43 0.00 0.94 TRUE
6 The Cancer Genome Atlas Lung Adenocarcinoma PARK7 0.03 0.03 lasso 1 0.02 5.0e-03 5.4 5.4 5.3e-08 -0.38 0.01 0.73 FALSE
7 The Cancer Genome Atlas Soft Tissue Sarcoma VAMP3 0.11 0.07 lasso 4 0.05 7.5e-04 5.4 -5.4 8.5e-08 0.26 0.00 0.98 FALSE