[Hub]/) : Traits : Trunk predicted mass :

chr15:61,446,353-63,043,877

Best TWAS P=5.04e-14 · Best GWAS P=1.46e-14 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous VPS13C 0.08 0.04 lasso 2 0.02 1.3e-02 -6.0 6.1 1.4e-09 -0.69 0.22 0.55 FALSE
2 GTEx Adipose Visceral Omentum VPS13C 0.16 0.06 enet 15 0.05 9.2e-04 6.6 6.3 2.3e-10 -0.64 0.42 0.34 FALSE
3 GTEx Skin Sun Exposed Lower leg VPS13C 0.09 0.09 lasso 2 0.08 1.8e-07 6.5 6.6 4.4e-11 -0.82 0.38 0.62 FALSE
4 GTEx Spleen VPS13C 0.27 0.19 lasso 7 0.12 6.6e-04 6.2 6.6 3.5e-11 -0.80 0.28 0.50 FALSE
5 GTEx Whole Blood VPS13C 0.09 0.00 enet 35 0.00 1.9e-01 -6.7 5.2 1.5e-07 -0.59 0.09 0.73 FALSE
6 The Cancer Genome Atlas Head and Neck Squamous Cell Carcinoma C2CD4A 0.03 0.01 blup 59 0.02 7.2e-03 -6.7 -5.2 1.7e-07 0.82 0.02 0.74 FALSE
7 The Cancer Genome Atlas Testicular Germ Cell Tumors C2CD4A 0.09 0.11 lasso 1 0.08 9.4e-04 -7.5 -7.5 5.0e-14 0.99 0.02 0.85 TRUE
8 The Cancer Genome Atlas Thyroid Carcinoma VPS13C 0.07 0.03 enet 15 0.03 5.3e-04 -7.6 6.2 7.2e-10 -0.73 0.02 0.92 FALSE