[Hub]/) : Traits : Trunk predicted mass :

chr1:201,158,976-202,607,593

Best TWAS P=1.76e-11 · Best GWAS P=6.07e-12 conditioned to 0.0212

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous SHISA4 0.09 0.04 lasso 3 0.03 1.5e-03 -5.5 -6.2 7.1e-10 -0.57 0.18 0.39 FALSE
2 GTEx Esophagus Muscularis LMOD1 0.16 0.09 enet 9 0.08 7.8e-06 6.9 -6.4 1.9e-10 -0.99 0.01 0.99 FALSE
3 GTEx Esophagus Muscularis RP11-307B6.3 0.20 0.12 lasso 3 0.12 5.6e-08 6.9 -6.2 4.1e-10 -0.98 0.01 0.99 FALSE
4 METSIM Adipose LMOD1 0.09 0.07 bslmm 496 0.07 4.8e-10 6.8 -6.5 7.7e-11 -0.97 0.02 0.98 FALSE
5 The Cancer Genome Atlas Cervical Squamous Cell Carcinoma LMOD1 0.07 0.06 blup 59 0.03 2.1e-02 6.8 -6.2 7.7e-10 -0.90 0.01 0.86 FALSE
6 The Cancer Genome Atlas Brain Lower Grade Glioma LMOD1 0.04 0.07 enet 6 0.05 9.4e-07 -6.2 -6.7 1.9e-11 -0.74 0.18 0.82 FALSE
7 The Cancer Genome Atlas Lung Adenocarcinoma LMOD1 0.04 0.01 blup 59 0.01 5.7e-02 6.7 -6.7 1.8e-11 -0.83 0.01 0.81 TRUE