[Hub]/) : Traits : Wheeze or whistling in the chest in last year : ← →

chr9:138,920,796-140,321,666

Best TWAS P=7.94e-10 · Best GWAS P=2.36e-09 conditioned to 1

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 CommonMind Brain Pre-frontal Cortex SNHG7 0.61 0.45 bslmm 381 0.47 2.1e-64 6 -5.8 5.5e-09 -0.98 0 1.00 FALSE
2 GTEx Adipose Subcutaneous SNHG7 0.42 0.30 lasso 3 0.30 3.8e-25 6 -5.9 3.6e-09 -1.00 0 1.00 FALSE
3 GTEx Artery Aorta SNHG7 0.37 0.26 lasso 3 0.33 8.2e-19 6 -5.6 1.6e-08 -0.90 0 1.00 FALSE
4 GTEx Artery Tibial SNHG7 0.28 0.26 enet 5 0.26 2.2e-20 6 -5.9 4.3e-09 -0.96 0 1.00 FALSE
5 GTEx Cells Transformed fibroblasts SNHG7 0.52 0.42 lasso 2 0.42 3.9e-34 6 -6.0 2.0e-09 -1.00 0 1.00 FALSE
6 GTEx Colon Transverse SNHG7 0.18 0.14 lasso 6 0.13 7.6e-07 6 -5.8 8.4e-09 -0.94 0 1.00 FALSE
7 GTEx Esophagus Gastroesophageal Junction SNHG7 0.38 0.37 lasso 5 0.35 1.7e-13 6 -5.8 5.3e-09 -0.99 0 1.00 FALSE
8 GTEx Esophagus Muscularis SNHG7 0.29 0.33 lasso 1 0.33 1.1e-20 6 -6.0 2.4e-09 -1.00 0 1.00 FALSE
9 GTEx Muscle Skeletal SNHG7 0.18 0.18 lasso 2 0.18 6.3e-17 6 -5.8 5.3e-09 -0.99 0 1.00 FALSE
10 GTEx Skin Sun Exposed Lower leg SNHG7 0.34 0.21 lasso 5 0.26 9.0e-22 6 -5.8 5.9e-09 -0.91 0 1.00 FALSE
11 GTEx Stomach SNHG7 0.20 0.13 enet 14 0.08 1.0e-04 6 -5.7 1.1e-08 -0.86 0 1.00 FALSE
12 GTEx Testis SNHG7 0.40 0.42 lasso 2 0.41 2.0e-19 6 -6.0 2.1e-09 -1.00 0 1.00 FALSE
13 GTEx Thyroid SNHG7 0.20 0.22 lasso 1 0.21 4.1e-16 6 -6.0 2.4e-09 -1.00 0 1.00 FALSE
14 YFS Blood SNHG7 0.59 0.38 enet 18 0.39 2.6e-137 6 -5.9 2.7e-09 -0.98 0 1.00 FALSE
15 The Cancer Genome Atlas Bladder Urothelial Carcinoma SNHG7 0.32 0.13 lasso 4 0.12 1.0e-10 6 -6.1 1.0e-09 -0.96 0 1.00 FALSE
16 The Cancer Genome Atlas Breast Invasive Carcinoma SNHG7 0.32 0.20 lasso 2 0.20 6.7e-40 6 -5.9 3.3e-09 -1.00 0 1.00 FALSE
17 The Cancer Genome Atlas Cervical Squamous Cell Carcinoma SNHG7 0.35 0.18 lasso 3 0.18 2.7e-09 6 -6.0 2.2e-09 -1.00 0 1.00 FALSE
18 The Cancer Genome Atlas Colon Adenocarcinoma SNHG7 0.32 0.22 enet 11 0.22 5.1e-13 6 -5.3 1.1e-07 -0.93 0 1.00 FALSE
19 The Cancer Genome Atlas Kidney Renal Clear Cell Carcinoma SNHG7 0.44 0.30 lasso 3 0.31 7.2e-35 6 -5.8 6.2e-09 -1.00 0 1.00 FALSE
20 The Cancer Genome Atlas Kidney Renal Papillary Cell Carcinoma SNHG7 0.52 0.33 lasso 3 0.33 2.0e-19 6 -5.9 2.9e-09 -1.00 0 1.00 FALSE
21 The Cancer Genome Atlas Brain Lower Grade Glioma SNHG7 0.58 0.37 lasso 4 0.38 1.1e-45 6 -5.6 2.5e-08 -0.98 0 1.00 FALSE
22 The Cancer Genome Atlas Liver Hepatocellular Carcinoma SNHG7 0.27 0.09 lasso 3 0.12 4.5e-06 6 -5.2 2.0e-07 -0.95 0 1.00 FALSE
23 The Cancer Genome Atlas Lung Adenocarcinoma SNHG7 0.29 0.15 enet 5 0.16 2.5e-18 6 -5.3 1.0e-07 -0.96 0 1.00 FALSE
24 The Cancer Genome Atlas Lung Squamous Cell Carcinoma SNHG7 0.24 0.16 enet 13 0.16 9.6e-18 6 -5.7 1.4e-08 -0.95 0 1.00 FALSE
25 The Cancer Genome Atlas Ovarian Serous Cystadenocarcinoma SNHG7 0.26 0.12 lasso 1 0.11 6.9e-08 6 -6.0 2.4e-09 -1.00 0 1.00 FALSE
26 The Cancer Genome Atlas Pancreatic Adenocarcinoma SNHG7 0.34 0.22 enet 8 0.23 6.2e-10 6 -5.4 8.6e-08 -0.92 0 1.00 FALSE
27 The Cancer Genome Atlas Prostate Adenocarcinoma SNHG7 0.51 0.37 enet 3 0.38 2.4e-42 6 -5.7 1.0e-08 -0.98 0 1.00 FALSE
28 The Cancer Genome Atlas Soft Tissue Sarcoma SNHG7 0.42 0.16 lasso 5 0.23 5.1e-14 6 -5.5 3.4e-08 -0.96 0 1.00 FALSE
29 The Cancer Genome Atlas Thyroid Carcinoma SNHG7 0.53 0.40 lasso 3 0.41 9.4e-43 6 -6.1 7.9e-10 -0.99 0 1.00 TRUE
30 The Cancer Genome Atlas Uterine Corpus Endometrial Carcinoma SNHG7 0.30 0.15 lasso 8 0.12 3.4e-04 6 -5.9 2.7e-09 -0.98 0 0.97 FALSE