Best TWAS P=8.95e-08 · Best GWAS P=7.05e-08 conditioned to 0.0606
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | YFS | Blood | DET1 | 0.17 | 0.20 | lasso | 4 | 0.20 | 1.4e-62 | -5.2 | -5.2 | 2e-07 | 1.00 | 0.00 | 1.00 | FALSE |
2 | The Cancer Genome Atlas | Breast Invasive Carcinoma | DET1 | 0.02 | 0.02 | blup | 48 | 0.01 | 8.6e-04 | 4.1 | -5.3 | 9e-08 | 0.79 | 0.06 | 0.86 | TRUE |