Best TWAS P=1.51e-07 · Best GWAS P=6.26e-07 conditioned to 0.00101
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | C17orf89 | 0.08 | 0.04 | blup | 51 | 0.05 | 1.1e-06 | -3.5 | -5.2 | 1.7e-07 | 0.25 | 0.04 | 0.64 | FALSE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | C17orf89 | 0.05 | 0.01 | blup | 50 | 0.03 | 1.5e-04 | 4.1 | -5.2 | 1.5e-07 | 0.37 | 0.00 | 0.10 | TRUE |