Best TWAS P=1.89e-07 · Best GWAS P=1.5e-07 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Colon Adenocarcinoma | CLEC18A | 0.14 | 0.18 | lasso | 5 | 0.15 | 4.5e-09 | -4.9 | -5.2 | 2.1e-07 | 0.98 | 0.01 | 0.99 | FALSE |
2 | The Cancer Genome Atlas | Soft Tissue Sarcoma | CLEC18A | 0.12 | 0.11 | lasso | 2 | 0.11 | 3.4e-07 | -5.2 | -5.2 | 1.9e-07 | 0.99 | 0.00 | 0.99 | TRUE |