Best TWAS P=3.59e-16 · Best GWAS P=3.8e-17 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Colon Sigmoid | RIN3 | 0.24 | 0.17 | lasso | 6 | 0.11 | 9.3e-05 | 8.2 | -8.2 | 3.6e-16 | -0.98 | 0.00 | 0.99 | TRUE |
2 | GTEx | Esophagus Muscularis | RIN3 | 0.17 | 0.05 | lasso | 6 | 0.06 | 1.6e-04 | 6.0 | -5.3 | 1.1e-07 | -0.48 | 0.11 | 0.57 | FALSE |