Best TWAS P=3e-07 · Best GWAS P=5.67e-07 conditioned to 0.069
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | CDC16 | 0.03 | 0.04 | lasso | 3 | 0.04 | 1.3e-05 | -5 | -5.1 | 3e-07 | 0.74 | 0.01 | 0.97 | TRUE |