Best TWAS P=3.23e-13 · Best GWAS P=3.19e-27 conditioned to 5.01e-17
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Colon Transverse | LIN7C | 0.13 | 0.04 | enet | 19 | 0.08 | 1.4e-04 | 4.6 | 7.3 | 3.2e-13 | 0.46 | 0.14 | 0.24 | TRUE |
| 2 | GTEx | Esophagus Mucosa | LIN7C | 0.10 | 0.05 | enet | 14 | 0.04 | 1.1e-03 | 3.5 | 5.3 | 1.5e-07 | 0.19 | 0.93 | 0.02 | FALSE |
| 3 | The Cancer Genome Atlas | Thyroid Carcinoma | LIN7C | 0.09 | 0.10 | enet | 7 | 0.09 | 8.1e-09 | 4.9 | 5.3 | 8.9e-08 | 0.16 | 0.00 | 1.00 | FALSE |