Best TWAS P=6.96e-12 · Best GWAS P=2.76e-18 conditioned to 4.57e-08
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | ZFP64 | 0.1 | 0.03 | lasso | 4 | 0.06 | 3.4e-05 | 2.0 | 6.9 | 7.0e-12 | -0.71 | 0.09 | 0.80 | TRUE |
2 | YFS | Blood | TSHZ2 | 0.1 | 0.03 | bslmm | 798 | 0.07 | 2.8e-22 | -7.1 | 5.9 | 3.7e-09 | -0.59 | 0.01 | 0.99 | FALSE |