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chr3:84,767,271-86,367,480
Best TWAS P=5.22e-09 · Best GWAS P=5.51e-13 conditioned to 7.51e-06
84.8M
85M
85.2M
85.4M
85.6M
85.8M
86M
86.2M
86.4M
0
2
4
6
8
10
12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Lung Adenocarcinoma
CADM2
0.08
0.04
lasso
4
0.05
2.1e-06
5.1
5.8
5.2e-09
-0.66
0.71
0.28
TRUE
3
The Cancer Genome Atlas
Lung Squamous Cell Carcinoma
CADM2
0.05
0.03
lasso
3
0.04
5.0e-05
5.1
5.6
2.2e-08
-0.59
0.88
0.06
FALSE
1
The Cancer Genome Atlas
Brain Lower Grade Glioma
CADM2
0.06
0.00
blup
339
0.00
2.7e-01
-5.0
-5.4
7.5e-08
0.75
0.02
0.77
FALSE