TWAS
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Usage
Models
Genes
Traits
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Traits
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Standing height
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chr9:112,309,305-113,711,437
Best TWAS P=7.63e-11 · Best GWAS P=1.11e-09 conditioned to 1.21e-09
112.4M
112.6M
112.8M
113M
113.2M
113.4M
113.6M
0
2
4
6
8
physical position
-log10 P
Conditional
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
CommonMind
Brain Pre-frontal Cortex
TXN
0.12
0.10
lasso
4
0.15
8.4e-18
-5.3
6.5
7.6e-11
0.00
0.01
0.99
TRUE
2
The Cancer Genome Atlas
Brain Lower Grade Glioma
TXN
0.06
0.04
enet
8
0.03
7.7e-05
-5.7
6.4
1.9e-10
0.01
0.00
0.99
FALSE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
TXN
0.17
0.11
lasso
3
0.12
5.4e-12
-5.7
5.4
7.1e-08
0.01
0.00
1.00
FALSE