Best TWAS P=6.22e-15 · Best GWAS P=5.57e-28 conditioned to 1.41e-16
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | KCNJ16 | 0.07 | 0.04 | bslmm | 421 | 0.04 | 1.4e-05 | -2.3 | 5.8 | 7.0e-09 | 0.39 | 0.50 | 0.30 | FALSE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | KCNJ16 | 0.07 | 0.02 | blup | 84 | 0.02 | 2.0e-02 | -2.2 | 7.8 | 6.2e-15 | 0.47 | 0.04 | 0.56 | TRUE |