TWAS
hub
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Usage
Models
Genes
Traits
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Traits
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Standing height
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chr19:32,372,820-33,776,241
Best TWAS P=1.4e-07 · Best GWAS P=5.01e-07 conditioned to 2.69e-06
32.4M
32.6M
32.8M
33M
33.2M
33.4M
33.6M
33.8M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
GTEx
Adipose Subcutaneous
PDCD5
0.16
0.03
enet
25
0.11
3.7e-09
2.0
-5.3
1.4e-07
-0.07
0.08
0.54
TRUE
2
The Cancer Genome Atlas
Thyroid Carcinoma
PDCD5
0.17
0.02
enet
9
0.10
7.6e-10
2.7
-5.2
2.4e-07
-0.10
0.00
0.64
FALSE