Best TWAS P=1.4e-07 · Best GWAS P=5.01e-07 conditioned to 2.69e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Adipose Subcutaneous | PDCD5 | 0.16 | 0.03 | enet | 25 | 0.11 | 3.7e-09 | 2.0 | -5.3 | 1.4e-07 | -0.07 | 0.08 | 0.54 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | PDCD5 | 0.17 | 0.02 | enet | 9 | 0.10 | 7.6e-10 | 2.7 | -5.2 | 2.4e-07 | -0.10 | 0.00 | 0.64 | FALSE |