Best TWAS P=1.81e-08 · Best GWAS P=2.24e-07 conditioned to 0.00109
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Esophageal Carcinoma | LILRB3 | 0.19 | 0.07 | blup | 6 | 0.09 | 0.00102 | 2.7 | -5.6 | 1.8e-08 | -0.38 | 0 | 0 | TRUE |
| 2 | The Cancer Genome Atlas | Liver Hepatocellular Carcinoma | LILRB3 | 0.11 | 0.02 | enet | 5 | 0.07 | 0.00035 | 2.7 | -5.2 | 2.4e-07 | -0.14 | 0 | 0 | FALSE |