[Hub]/) : Traits : Standing height :

chr2:127,319,936-129,652,948

Best TWAS P=1.69e-09 · Best GWAS P=6.55e-09 conditioned to 0.125

Associated models

# Study Tissue Gene h2 eQTL R2 model # weights model R2 model R2 P eQTL GWAS Z TWAS Z TWAS P Top SNP corr PP3 PP4 joint
1 GTEx Adipose Subcutaneous UGGT1 0.07 0.05 lasso 3 0.06 1.7e-05 5.8 -5.8 6.7e-09 -1.00 0.01 0.99 FALSE
2 GTEx Artery Aorta UGGT1 0.16 0.16 lasso 3 0.17 1.1e-09 5.8 -5.6 2.8e-08 -0.98 0.01 0.99 FALSE
3 GTEx Brain Cerebellar Hemisphere ERCC3 0.23 0.02 enet 27 0.05 2.4e-02 5.2 -5.3 1.3e-07 -0.04 0.02 0.75 FALSE
4 GTEx Breast Mammary Tissue MAP3K2 0.23 0.07 lasso 5 0.07 1.8e-04 4.7 5.5 3.4e-08 0.01 0.02 0.95 FALSE
5 GTEx Cells Transformed fibroblasts UGGT1 0.13 0.13 lasso 3 0.12 2.3e-09 5.6 -5.8 7.4e-09 -0.98 0.01 0.99 FALSE
6 GTEx Esophagus Gastroesophageal Junction ERCC3 0.17 0.08 lasso 3 0.10 1.8e-04 4.9 -5.2 1.8e-07 0.05 0.03 0.94 FALSE
7 GTEx Esophagus Mucosa ERCC3 0.18 0.13 lasso 7 0.13 9.7e-09 4.8 -5.3 1.4e-07 0.06 0.02 0.97 FALSE
8 GTEx Esophagus Muscularis UGGT1 0.12 0.13 lasso 7 0.13 2.7e-08 5.8 -5.8 6.5e-09 -1.00 0.01 0.99 FALSE
9 GTEx Esophagus Muscularis ERCC3 0.18 0.11 lasso 7 0.15 3.2e-09 4.8 -5.2 2.5e-07 0.05 0.02 0.97 FALSE
10 GTEx Nerve Tibial UGGT1 0.18 0.15 enet 18 0.13 1.6e-09 5.8 -6.0 1.7e-09 -0.91 0.01 0.99 TRUE
11 GTEx Skin Sun Exposed Lower leg UGGT1 0.07 0.07 lasso 5 0.05 6.3e-05 5.8 -5.8 4.8e-09 -1.00 0.01 0.98 FALSE
12 GTEx Skin Sun Exposed Lower leg MAP3K2 0.06 0.04 enet 11 0.04 5.0e-04 5.2 5.4 7.7e-08 0.02 0.01 0.98 FALSE
13 GTEx Spleen ERCC3 0.44 0.42 enet 21 0.42 4.9e-12 4.8 -5.3 1.4e-07 0.04 0.02 0.97 FALSE
14 METSIM Adipose UGGT1 0.10 0.10 enet 17 0.10 2.5e-14 5.6 -5.2 1.6e-07 -0.93 0.01 0.99 FALSE
15 ROSMAP Brain Pre-frontal Cortex MAP3K2 0.11 0.08 enet 19 0.08 3.2e-10 4.9 5.4 6.0e-08 -0.05 0.02 0.98 FALSE
16 YFS Blood ERCC3 0.07 0.03 bslmm 457 0.05 6.5e-16 5.0 -5.6 2.1e-08 0.05 0.02 0.98 TRUE
17 The Cancer Genome Atlas Breast Invasive Carcinoma UGGT1 0.02 0.02 blup 65 0.02 2.5e-04 5.6 -5.8 5.0e-09 -0.89 0.01 0.89 FALSE
18 The Cancer Genome Atlas Thyroid Carcinoma UGGT1 0.04 0.00 blup 65 0.02 8.6e-03 5.7 -5.4 7.7e-08 -0.91 0.01 0.79 FALSE