TWAS
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About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Qualifications: CSEs or equivalent
:
chr1:150,008,790-151,435,941
Best TWAS P=3.97e-08 · Best GWAS P=1.1e-05 conditioned to 0.894
150M
150.2M
150.4M
150.6M
150.8M
151M
151.2M
151.4M
0
1
2
3
4
5
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Thyroid Carcinoma
LYSMD1
0.04
0.03
blup
32
0.02
1.1e-02
3.7
5.5
4.0e-08
0.77
0.00
0.06
TRUE
1
METSIM
Adipose
CTSS
0.09
0.02
enet
25
0.04
7.4e-07
3.4
-5.2
2.4e-07
-0.57
0.03
0.59
TRUE