Best TWAS P=7.37e-11 · Best GWAS P=7.43e-18 conditioned to 1.74e-08
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | CDKN2B | 0.08 | 0.05 | lasso | 4 | 0.06 | 2.4e-07 | 6.4 | 6.5 | 7.4e-11 | 0.74 | 0.89 | 0.11 | TRUE |
| 2 | CommonMind | Brain Pre-frontal Cortex | CDKN2B-AS1 | 0.11 | 0.02 | blup | 501 | 0.03 | 1.7e-04 | 6.4 | 5.8 | 6.5e-09 | 0.67 | 0.04 | 0.95 | FALSE |