TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Medication: Aspirin
:
←
chr15:90,730,363-92,135,418
Best TWAS P=1.9e-08 · Best GWAS P=1.04e-06 conditioned to 0.869
90.8M
91M
91.2M
91.4M
91.6M
91.8M
92M
92.2M
0
1
2
3
4
5
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Breast Invasive Carcinoma
FES
0.06
0.05
blup
46
0.07
7.4e-14
4.9
-5.6
1.9e-08
-0.88
0
0.98
TRUE
1
GTEx
Cells Transformed fibroblasts
FES
0.28
0.17
enet
21
0.20
2.8e-15
4.9
-5.3
1.2e-07
-0.92
0
0.99
FALSE
4
The Cancer Genome Atlas
Stomach Adenocarcinoma
FES
0.04
0.01
blup
46
0.02
1.7e-02
4.5
-5.3
1.4e-07
-0.75
0
0.27
FALSE
3
The Cancer Genome Atlas
Prostate Adenocarcinoma
FES
0.12
0.09
lasso
5
0.08
4.1e-09
4.9
-5.2
2.5e-07
-0.95
0
0.99
FALSE