Best TWAS P=2.78e-19 · Best GWAS P=7.48e-22 conditioned to 5.01e-11
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TRPS1 | 0.04 | 0.03 | blup | 102 | 0.01 | 0.00961 | 4.9 | -9.0 | 2.8e-19 | 0.40 | 0.07 | 0.12 | TRUE |
| 2 | The Cancer Genome Atlas | Thyroid Carcinoma | TRPS1 | 0.09 | 0.03 | blup | 102 | 0.03 | 0.00052 | -8.7 | 5.2 | 1.7e-07 | -0.66 | 0.03 | 0.68 | FALSE |