Best TWAS P=6.54e-09 · Best GWAS P=4.7e-15 conditioned to 1.21e-07
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | CommonMind | Brain Pre-frontal Cortex | PDZRN4 | 0.33 | 0.32 | enet | 23 | 0.35 | 8.5e-44 | 4.4 | 5.8 | 6.5e-09 | 0.78 | 1.00 | 0.00 | TRUE |
| 2 | The Cancer Genome Atlas | Glioblastoma Multiforme | PDZRN4 | 0.14 | 0.05 | blup | 250 | 0.05 | 1.3e-02 | 5.9 | -5.7 | 1.2e-08 | -0.64 | 0.07 | 0.15 | FALSE |