Best TWAS P=7e-08 · Best GWAS P=6.93e-08 conditioned to 0.00106
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Skin Not Sun Exposed Suprapubic | RGS19 | 0.51 | 0.28 | enet | 28 | 0.32 | 4.3e-18 | 3.5 | 5.3 | 1.4e-07 | -0.53 | 0.73 | 0.10 | TRUE |
2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | SLC2A4RG | 0.03 | 0.01 | blup | 48 | 0.02 | 2.4e-03 | -4.3 | 5.4 | 7.0e-08 | 0.03 | 0.02 | 0.44 | TRUE |