Best TWAS P=1.6e-07 · Best GWAS P=2.85e-06 conditioned to 4.81e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Prostate | CTA-445C9.15 | 0.40 | 0.28 | lasso | 4 | 0.27 | 1.8e-07 | 4.7 | 5.2 | 1.6e-07 | -0.02 | 0.01 | 0.90 | TRUE |
| 2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | TPST2 | 0.05 | 0.00 | blup | 108 | 0.02 | 1.2e-03 | -1.6 | -5.2 | 2.1e-07 | 0.07 | 0.01 | 0.29 | FALSE |