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chr12:54,158,993-54,760,824
Best TWAS P=7.45e-16 · Best GWAS P=8.64e-17 conditioned to 0.0119
54.2M
54.3M
54.4M
54.5M
54.6M
54.7M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
3
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
HOXC8
0.03
0.05
enet
5
0.04
2.4e-05
-8.3
8.1
7.4e-16
-0.89
0.00
0.99
TRUE
4
The Cancer Genome Atlas
Uterine Corpus Endometrial Carcinoma
FLJ12825
0.15
0.02
lasso
5
0.06
8.9e-03
-8.2
-7.8
5.7e-15
0.76
0.01
0.69
FALSE
2
The Cancer Genome Atlas
Kidney Renal Clear Cell Carcinoma
HOXC6
0.03
0.02
blup
50
0.03
3.9e-04
-8.3
7.8
6.9e-15
-0.78
0.00
0.97
FALSE
1
The Cancer Genome Atlas
Head and Neck Squamous Cell Carcinoma
HOXC5
0.02
0.00
blup
51
0.01
2.4e-02
-8.3
-7.4
9.9e-14
0.74
0.01
0.74
FALSE