Best TWAS P=1.94e-09 · Best GWAS P=1.78e-11 conditioned to NaN
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Artery Aorta | ZNF239 | 0.15 | 0.05 | enet | 15 | 0.10 | 4.9e-06 | 4.2 | -5.2 | 1.8e-07 | -0.44 | 0.71 | 0.04 | TRUE |
| 2 | GTEx | Testis | ZNF239 | 0.58 | 0.45 | lasso | 7 | 0.52 | 2.9e-26 | 6.4 | 6.0 | 1.9e-09 | 0.93 | 0.01 | 0.99 | TRUE |
| 3 | The Cancer Genome Atlas | Bladder Urothelial Carcinoma | ZNF239 | 0.04 | 0.03 | blup | 65 | 0.03 | 6.0e-04 | 4.4 | -5.6 | 2.8e-08 | -0.77 | 0.03 | 0.81 | TRUE |
| 4 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | ZNF239 | 0.07 | 0.00 | blup | 63 | 0.01 | 5.5e-02 | 4.8 | -5.5 | 3.1e-08 | -0.59 | 0.04 | 0.41 | TRUE |