Best TWAS P=1.99e-07 · Best GWAS P=4.3e-07 conditioned to 1
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Esophagus Gastroesophageal Junction | PMS2P5 | 0.23 | 0.19 | lasso | 2 | 0.18 | 5.4e-07 | 5.1 | -5.1 | 3.1e-07 | -0.97 | 0 | 0.99 | FALSE |
| 2 | GTEx | Testis | PMS2P5 | 0.22 | 0.13 | lasso | 2 | 0.13 | 3.1e-06 | 5.1 | -5.2 | 2.0e-07 | -0.99 | 0 | 0.98 | TRUE |