Best TWAS P=7e-08 · Best GWAS P=3.35e-12 conditioned to 3.91e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | METSIM | Adipose | CFDP1 | 0.06 | 0.03 | bslmm | 405 | 0.04 | 4.9e-07 | -3.5 | -5.3 | 1.3e-07 | 0.42 | 0.92 | 0.01 | FALSE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | CFDP1 | 0.13 | 0.07 | enet | 10 | 0.10 | 2.1e-06 | -3.6 | -5.4 | 7.0e-08 | 0.62 | 0.04 | 0.93 | TRUE |