TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Blood White Count
:
←
→
chr10:78,845,149-80,383,574
Best TWAS P=2.1e-09 · Best GWAS P=1.06e-07 conditioned to 1
78.8M
79M
79.2M
79.4M
79.6M
79.8M
80M
80.2M
80.4M
0
2
4
6
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
5
GTEx
Ovary
RP13-39P12.3
0.42
0.29
lasso
5
0.33
7.5e-09
5.3
6.0
2.1e-09
0.96
0.01
0.99
TRUE
4
GTEx
Ovary
DLG5
0.62
0.38
lasso
6
0.40
5.3e-11
5.3
5.7
1.3e-08
0.98
0.01
0.99
FALSE
1
GTEx
Adrenal Gland
DLG5
0.22
0.14
lasso
6
0.11
8.5e-05
4.8
5.6
2.7e-08
0.95
0.02
0.96
FALSE
3
GTEx
Liver
DLG5
0.42
0.31
lasso
5
0.28
2.1e-08
5.3
5.2
2.5e-07
0.99
0.01
0.99
FALSE
2
GTEx
Heart Atrial Appendage
DLG5
0.32
0.23
lasso
4
0.24
3.9e-11
5.1
5.1
3.1e-07
0.99
0.01
0.99
FALSE