Best TWAS P=1.66e-14 · Best GWAS P=4.31e-38 conditioned to 2.72e-25
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Cells Transformed fibroblasts | ETS1 | 0.21 | 0.12 | lasso | 4 | 0.11 | 7.8e-09 | -7.8 | 7.7 | 1.7e-14 | -0.10 | 0.96 | 0.03 | TRUE |
2 | YFS | Blood | ETS1 | 0.02 | 0.00 | bslmm | 616 | 0.00 | 9.6e-02 | -1.6 | 7.0 | 2.2e-12 | -0.36 | 0.01 | 0.72 | TRUE |