TWAS
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Usage
Models
Genes
Traits
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Traits
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Blood White Count
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chr1:173,885,712-175,194,390
Best TWAS P=2.23e-08 · Best GWAS P=5.73e-06 conditioned to 0.497
174M
174.2M
174.4M
174.6M
174.8M
175M
175.2M
0
1
2
3
4
5
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Pancreatic Adenocarcinoma
RABGAP1L
0.35
0.04
blup
306
0.07
0.00063
-4.2
-5.6
2.2e-08
0.87
0.00
0.12
TRUE
2
The Cancer Genome Atlas
Thyroid Carcinoma
RABGAP1L
0.09
0.01
blup
305
0.01
0.08980
-3.5
-5.3
1.2e-07
0.77
0.01
0.14
FALSE