Best TWAS P=2.63e-09 · Best GWAS P=1.16e-09 conditioned to 1
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | CommonMind | Brain Pre-frontal Cortex | KIAA1614 | 0.19 | 0.17 | lasso | 7 | 0.18 | 2.9e-21 | -6.1 | 6.0 | 2.6e-09 | -0.97 | 0.00 | 1.00 | TRUE |
2 | The Cancer Genome Atlas | Brain Lower Grade Glioma | KIAA1614 | 0.14 | 0.05 | enet | 11 | 0.07 | 9.9e-09 | 4.6 | 5.2 | 1.8e-07 | -0.54 | 0.04 | 0.93 | FALSE |
3 | The Cancer Genome Atlas | Thyroid Carcinoma | KIAA1614 | 0.25 | 0.08 | lasso | 3 | 0.07 | 3.6e-07 | -6.1 | 5.4 | 5.5e-08 | -0.94 | 0.00 | 1.00 | FALSE |