TWAS
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About
Usage
Models
Genes
Traits
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Traits
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Blood White Count
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chr14:68,577,892-70,627,266
Best TWAS P=1.36e-14 · Best GWAS P=4.96e-16 conditioned to 2.33e-12
68.5M
69M
69.5M
70M
70.5M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
NTR
Blood
SLC39A9
0.08
0.05
bslmm
476
0.05
3.0e-15
7.6
7.7
1.4e-14
0.02
0.00
1.00
TRUE
2
YFS
Blood
ZFP36L1
0.05
0.02
lasso
5
0.02
3.5e-07
-7.9
7.1
1.1e-12
0.15
0.01
0.99
TRUE
3
The Cancer Genome Atlas
Rectum Adenocarcinoma
ZFP36L1
0.63
0.02
blup
59
0.09
4.3e-03
8.1
-6.3
3.8e-10
-0.48
0.00
0.50
FALSE