Best TWAS P=1.07e-07 · Best GWAS P=2.35e-07 conditioned to 0.268
# | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | GTEx | Artery Tibial | ITGA2 | 0.14 | 0.06 | enet | 18 | 0.08 | 1.5e-06 | 5.2 | 5.3 | 1.1e-07 | 0.87 | 0 | 1 | TRUE |
2 | GTEx | Heart Left Ventricle | ITGA2 | 0.20 | 0.20 | lasso | 3 | 0.17 | 2.5e-09 | 5.2 | 5.2 | 2.0e-07 | 1.00 | 0 | 1 | FALSE |