Best TWAS P=2.58e-12 · Best GWAS P=3.43e-14 conditioned to 0.00345
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Pancreas | SLC2A13 | 0.14 | 0.06 | enet | 10 | 0.06 | 1.4e-03 | -7.6 | 7.0 | 2.6e-12 | -0.94 | 0.01 | 0.98 | TRUE |
| 2 | NTR | Blood | LRRK2 | 0.05 | 0.03 | blup | 617 | 0.05 | 9.8e-15 | -6.0 | 6.5 | 7.4e-11 | -0.69 | 0.56 | 0.44 | FALSE |
| 3 | YFS | Blood | LRRK2 | 0.08 | 0.07 | enet | 20 | 0.08 | 4.3e-26 | -5.6 | 5.4 | 5.9e-08 | -0.85 | 0.73 | 0.27 | FALSE |