Best TWAS P=1.14e-09 · Best GWAS P=2.06e-10 conditioned to 0.017
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | The Cancer Genome Atlas | Breast Invasive Carcinoma | SLC24A4 | 0.06 | 0.06 | blup | 162 | 0.05 | 4.6e-11 | 6.3 | -6.1 | 1.1e-09 | -0.82 | 0.01 | 0.99 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Papillary Cell Carcinoma | SLC24A4 | 0.23 | 0.12 | blup | 160 | 0.20 | 6.0e-12 | 3.0 | -5.9 | 3.9e-09 | -0.62 | 0.05 | 0.94 | FALSE |