Best TWAS P=6.6e-08 · Best GWAS P=1.24e-11 conditioned to 1.13e-06
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | GTEx | Nerve Tibial | BAI1 | 0.20 | 0.03 | enet | 39 | 0.06 | 0.00008 | -4.3 | -5.4 | 6.6e-08 | 0.45 | 0.10 | 0.14 | TRUE |
| 2 | The Cancer Genome Atlas | Lung Squamous Cell Carcinoma | TSNARE1 | 0.03 | 0.02 | blup | 104 | 0.02 | 0.00076 | -6.4 | 5.4 | 8.7e-08 | -0.82 | 0.02 | 0.92 | FALSE |