Best TWAS P=3.91e-08 · Best GWAS P=2.3e-06 conditioned to 0.0523
| # | Study | Tissue | Gene | h2 | eQTL R2 | model | # weights | model R2 | model R2 P | eQTL GWAS Z | TWAS Z | TWAS P | Top SNP corr | PP3 | PP4 | joint |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | YFS | Blood | HSF2 | 0.10 | 0.09 | bslmm | 429 | 0.09 | 9.6e-29 | -4.3 | 5.5 | 3.9e-08 | -0.57 | 0.02 | 0.93 | TRUE |
| 2 | The Cancer Genome Atlas | Kidney Renal Clear Cell Carcinoma | HSF2 | 0.15 | 0.04 | blup | 68 | 0.05 | 1.6e-06 | -4.0 | 5.4 | 8.4e-08 | -0.62 | 0.02 | 0.84 | FALSE |