TWAS
hub
About
Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Crohns Disease (2012)
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chr18:12,538,482-13,133,577
Best TWAS P=2.43e-14 · Best GWAS P=5.06e-13 conditioned to 0.346
12.6M
12.7M
12.8M
12.9M
13M
13.1M
0
2
4
6
8
10
12
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
1
The Cancer Genome Atlas
Prostate Adenocarcinoma
PTPN2
0.05
0.03
lasso
3
0.03
0.00055
6.6
-7.6
2.4e-14
-0.89
0.01
0.91
TRUE