TWAS
hub
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Usage
Models
Genes
Traits
[Hub]/) :
Traits
:
Crohns Disease (2017)
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chr2:230,396,934-231,875,433
Best TWAS P=8.57e-08 · Best GWAS P=2.78e-14 conditioned to 2.46e-08
230.4M
230.6M
230.8M
231M
231.2M
231.4M
231.6M
231.8M
0
5
10
15
physical position
-log10 P
Marginal
▼
Associated models
#
Study
Tissue
Gene
h2
eQTL R2
model
# weights
model R2
model R2 P
eQTL GWAS Z
TWAS Z
TWAS P
Top SNP corr
PP3
PP4
joint
2
The Cancer Genome Atlas
Ovarian Serous Cystadenocarcinoma
SP140
0.07
0.01
blup
134
0.00
1.7e-01
-4.6
-5.3
8.6e-08
-0.56
0.02
0.61
TRUE
1
NTR
Blood
SP140
0.03
0.00
blup
496
0.01
2.7e-05
7.3
-5.3
1.0e-07
-0.51
0.02
0.89
FALSE