[Hub]/) : Traits : Crohns Disease (2017) : ← →

chr12:39,904,158-41,454,590

Best TWAS P=2.81e-11 · Best GWAS P=6.06e-21 conditioned to 3.56e-09

#	Study	Tissue	Gene	h2	eQTL R2	model	# weights	model R2	model R2 P	eQTL GWAS Z	TWAS Z	TWAS P	Top SNP corr	PP3	PP4	joint
3	GTEx	Stomach	LRRK2	0.14	0.00	lasso	3	0.03	1.8e-02	7.8	6.7	2.8e-11	0.71	0.54	0.44	TRUE
1	GTEx	Artery Coronary	LRRK2	0.33	-0.01	enet	48	0.12	1.0e-04	2.8	5.9	3.0e-09	0.56	0.03	0.94	TRUE
2	GTEx	Nerve Tibial	LRRK2	0.20	0.11	lasso	6	0.19	1.2e-13	2.3	5.9	3.3e-09	0.55	0.75	0.25	FALSE